Ing. David Kodr, Ph.D.

e-mail: david.kodr@uochb.cas.cz
phone: +420 220 183 344


Born 11. 08. 1993 in Prague (Czech Republic).

Scientific CV:
2013-2016 undergraduate study, University of Chemistry and Technology Prague, Faculty of Chemical Technology, B. Sc. degree - specialization Drug Biotechnology (supervisor prof. RNDr. Pavel Drašar, DSc.)
2016-2018 undergraduate study, University of Chemistry and Technology Prague, Faculty of Chemical Technology, M. Sc. degree - specialization Chemistry of Natural Compounds (supervisor prof. RNDr. Pavel Drašar, DSc.)
winter 2017 international internship, University of Jyväskylä (supervisor doc. Elina Sievänen)
2018-2023 PhD study, Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic (supervisor Prof. Ing. Michal Hocek, CSc., DSc.)


List of publications:

8.	Kodr, D.; Ortiz, M.; Sýkorová, V.; Yenice, C. P.; Lesnikowski, Z. J.; O’Sullivan, C. K.; Hocek, M.: "Normalized Multipotential Redox Coding of DNA Bases for Determination of Total Nucleotide Composition" Anal. Chem. 2023, 95, 12586-12589.
7.	Kuba, M.; Khorosyy, P.; Lepšík, M.; Kužmová, E.; Kodr, D.; Kraus, T.; Hocek, M.; Obermayer-Pietsch, B.; O’Sullivan, C. K.: "Real-time Imaging of Nascent DNA in Live Cells by Monitoring the Fluorescence Lifetime of DNA-Incorporated Thiazole Orange-Modified Nucleotides" Angew. Chem. Int. Ed. 2023, 62, e202307548.
6.	Ortiz, M.; Jauset-Rubio, M.; Trummer, O.; Foessl, I.; Kodr, D.; Acero, J. L.; Botero, M. L.; Biggs, P.; Lenartowicz, D.; Trajanoska, K.; Rivadeneira, F.; Hocek, M.; Obermayer-Pietsch, B.; O’Sullivan, C. K.: "Generic Platform for the Multiplexed Targeted Electrochemical Detection of Osteoporosis-Associated Single Nucleotide Polymorphisms Using Recombinase Polymerase Solid-Phase Primer Elongation and Ferrocene-Modified Nucleoside Triphosphates" ACS Cent. Sci. 2023, 9, 1591-1602.
5.	Kodr, D.; Kužmová, E.; Pohl, R.; Kraus, T. and Hocek, M.: "Lipid-linked nucleoside triphosphates for enzymatic synthesis of hydrophobic oligonucleotides with enhanced membrane anchoring efficiency" Chem. Sci. 2023, 14, 4059-4069.
4.	Ortiz, M.; Jauset-Rubio, M.; Kodr, D.; Simonova, A.; Hocek, M.; O´Sullivan, C. K.: "Solid-phase recombinase polymerase amplification using ferrocene-labelled dNTPs for electrochemical detection of single nucleotide polymorphisms" Biosens. Bioelectron. 2021, 198, 113825.
3.	Ortiz, M.; Jauset-Rubio, M.; Skouridou, V.; Machado, D.; Viveiros, M.; Clark, T. G.; Simonova, A.; Kodr, D.; Hocek, M.; O´Sullivan, C. K.: "Electrochemical Detection of Single-Nucleotide Polymorphism Associated with Rifampicin Resistance in Mycobacterium tuberculosis Using Solid-Phase Primer Elongation with Ferrocene-Linked RedoxLabeled Nucleotides" ACS Sens. 2021, 6, 4398-4407.
2.	Kodr, D.; Yenice, C. P.; Simonova, A.; Saftic, D. P.; Pohl, R.; Sýkorová, V.; Ortiz, M.; Havran, L.; Fojta, M.; Lesnikowski, Z. J.; O’Sullivan, C. K.; Hocek, M.: "Carborane- or Metallacarborane-Linked Nucleotides for Redox Labeling. Orthogonal Multipotential Coding of all Four DNA Bases for Electrochemical Analysis and Sequencing" J. Am. Chem. Soc. 2021, 143 (18), 7124-7134.
1.	Pavlíčková, V.; Jurášek, M.; Rimpelová, S.; Záruba, K.; Sedlák, D.; Šimková, M.; Kodr, D.; Staňková, E.; Fähnrich, J.; Rottnerová, Z.; Bartůněk, P.; Lapčík, O.; Drašar, P.; Ruml, T.: "Oxime-based 19-Nortestosterone-Pheophorbide a Conjugate: Bimodal Controlled Release Concept for PDT" J. Mater. Chem. B 2019, 7, 5465-5477.